Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.93■□□□□ 0.46
Nkx2-3P97334 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.93■□□□□ 0.46
Nkx2-3P97334 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.93■□□□□ 0.46
Nkx2-3P97334 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nkx2-3P97334 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nkx2-3P97334 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.93■□□□□ 0.46
Nkx2-3P97334 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.92■□□□□ 0.46
Nkx2-3P97334 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Gm15824-201ENSMUST00000119516 955 ntBASIC17.92■□□□□ 0.46
Nkx2-3P97334 Gm27839-201ENSMUST00000184242 106 ntBASIC17.92■□□□□ 0.46
Nkx2-3P97334 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.92■□□□□ 0.46
Nkx2-3P97334 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Mir1982-201ENSMUST00000157368 74 ntBASIC17.91■□□□□ 0.46
Nkx2-3P97334 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Gm8652-201ENSMUST00000181363 964 ntBASIC17.91■□□□□ 0.46
Nkx2-3P97334 AY702102-202ENSMUST00000194651 1173 ntBASIC17.91■□□□□ 0.46
Nkx2-3P97334 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.91■□□□□ 0.46
Nkx2-3P97334 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.91■□□□□ 0.46
Nkx2-3P97334 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Nkx2-3P97334 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-3P97334 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms