Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC9.57□□□□□ -0.88
PrkdcP97313 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
PrkdcP97313 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
PrkdcP97313 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
PrkdcP97313 Gm42471-201ENSMUST00000201457 1865 ntBASIC9.57□□□□□ -0.88
PrkdcP97313 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
PrkdcP97313 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.56□□□□□ -0.88
PrkdcP97313 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
PrkdcP97313 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC9.56□□□□□ -0.88
PrkdcP97313 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
PrkdcP97313 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.56□□□□□ -0.88
PrkdcP97313 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.56□□□□□ -0.88
PrkdcP97313 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Gm24548-201ENSMUST00000158650 108 ntBASIC9.56□□□□□ -0.88
PrkdcP97313 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Gm45219-201ENSMUST00000205602 465 ntBASIC9.56□□□□□ -0.88
PrkdcP97313 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.56□□□□□ -0.88
PrkdcP97313 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Gm10146-201ENSMUST00000072739 309 ntBASIC9.56□□□□□ -0.88
PrkdcP97313 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.56□□□□□ -0.88
PrkdcP97313 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
PrkdcP97313 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
PrkdcP97313 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.56□□□□□ -0.88
PrkdcP97313 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.56□□□□□ -0.88
PrkdcP97313 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Ccdc166-201ENSMUST00000182172 2584 ntBASIC9.56□□□□□ -0.88
PrkdcP97313 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.56□□□□□ -0.88
PrkdcP97313 Gm14726-201ENSMUST00000120623 896 ntBASIC9.56□□□□□ -0.88
PrkdcP97313 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
PrkdcP97313 Ighv1-51-201ENSMUST00000192903 354 ntBASIC9.56□□□□□ -0.88
PrkdcP97313 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.56□□□□□ -0.88
PrkdcP97313 AC102291.3-201ENSMUST00000226566 405 ntBASIC9.56□□□□□ -0.88
PrkdcP97313 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC9.56□□□□□ -0.88
PrkdcP97313 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
PrkdcP97313 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
PrkdcP97313 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.55□□□□□ -0.88
PrkdcP97313 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC9.55□□□□□ -0.88
PrkdcP97313 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
PrkdcP97313 Gm27438-201ENSMUST00000183480 110 ntBASIC9.55□□□□□ -0.88
PrkdcP97313 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC9.55□□□□□ -0.88
PrkdcP97313 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC9.55□□□□□ -0.88
PrkdcP97313 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
PrkdcP97313 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
PrkdcP97313 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
PrkdcP97313 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.55□□□□□ -0.88
PrkdcP97313 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.55□□□□□ -0.88
PrkdcP97313 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.55□□□□□ -0.88
PrkdcP97313 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC9.55□□□□□ -0.88
PrkdcP97313 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC9.55□□□□□ -0.88
PrkdcP97313 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC9.55□□□□□ -0.88
PrkdcP97313 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.55□□□□□ -0.88
PrkdcP97313 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
PrkdcP97313 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
PrkdcP97313 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.55□□□□□ -0.88
PrkdcP97313 Gm19208-201ENSMUST00000213861 912 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms