Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Lhx1P63006 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Lhx1P63006 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.1□□□□□ -0.15
Lhx1P63006 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.1□□□□□ -0.15
Lhx1P63006 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
Lhx1P63006 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.1□□□□□ -0.15
Lhx1P63006 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.1□□□□□ -0.15
Lhx1P63006 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.1□□□□□ -0.15
Lhx1P63006 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.1□□□□□ -0.15
Lhx1P63006 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Lhx1P63006 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lhx1P63006 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lhx1P63006 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Lhx1P63006 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Lhx1P63006 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.09□□□□□ -0.15
Lhx1P63006 Gm27838-201ENSMUST00000184829 128 ntBASIC14.09□□□□□ -0.15
Lhx1P63006 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.09□□□□□ -0.15
Lhx1P63006 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.09□□□□□ -0.15
Lhx1P63006 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.09□□□□□ -0.15
Lhx1P63006 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.09□□□□□ -0.15
Lhx1P63006 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.09□□□□□ -0.15
Lhx1P63006 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lhx1P63006 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx1P63006 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx1P63006 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx1P63006 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx1P63006 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Lhx1P63006 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx1P63006 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Lhx1P63006 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Lhx1P63006 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Lhx1P63006 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx1P63006 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lhx1P63006 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.08□□□□□ -0.16
Lhx1P63006 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.08□□□□□ -0.16
Lhx1P63006 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Mir6977-201ENSMUST00000184960 64 ntBASIC14.08□□□□□ -0.16
Lhx1P63006 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.08□□□□□ -0.16
Lhx1P63006 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.08□□□□□ -0.16
Lhx1P63006 Gm6916-202ENSMUST00000205523 195 ntBASIC14.08□□□□□ -0.16
Lhx1P63006 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.08□□□□□ -0.16
Lhx1P63006 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Lhx1P63006 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lhx1P63006 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lhx1P63006 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lhx1P63006 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx1P63006 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Lhx1P63006 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx1P63006 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx1P63006 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx1P63006 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lhx1P63006 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx1P63006 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx1P63006 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx1P63006 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx1P63006 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lhx1P63006 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms