Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ybx1P62960 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ybx1P62960 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.69□□□□□ -0.06
Ybx1P62960 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Gm33320-201ENSMUST00000192232 530 ntBASIC14.69□□□□□ -0.06
Ybx1P62960 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.69□□□□□ -0.06
Ybx1P62960 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ybx1P62960 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.69□□□□□ -0.06
Ybx1P62960 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ybx1P62960 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.69□□□□□ -0.06
Ybx1P62960 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.68□□□□□ -0.06
Ybx1P62960 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Ybx1P62960 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.68□□□□□ -0.06
Ybx1P62960 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ybx1P62960 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Ybx1P62960 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.68□□□□□ -0.06
Ybx1P62960 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Gm15460-201ENSMUST00000118147 391 ntBASIC14.68□□□□□ -0.06
Ybx1P62960 Gm11918-201ENSMUST00000121660 179 ntBASIC14.68□□□□□ -0.06
Ybx1P62960 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.68□□□□□ -0.06
Ybx1P62960 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Mir7085-201ENSMUST00000184353 66 ntBASIC14.68□□□□□ -0.06
Ybx1P62960 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.68□□□□□ -0.06
Ybx1P62960 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ybx1P62960 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.68□□□□□ -0.06
Ybx1P62960 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.68□□□□□ -0.06
Ybx1P62960 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.68□□□□□ -0.06
Ybx1P62960 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ybx1P62960 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ybx1P62960 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Ybx1P62960 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Ybx1P62960 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.67□□□□□ -0.06
Ybx1P62960 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.67□□□□□ -0.06
Ybx1P62960 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.67□□□□□ -0.06
Ybx1P62960 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.67□□□□□ -0.06
Ybx1P62960 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.67□□□□□ -0.06
Ybx1P62960 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.67□□□□□ -0.06
Ybx1P62960 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.67□□□□□ -0.06
Ybx1P62960 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ybx1P62960 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ybx1P62960 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ybx1P62960 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Ybx1P62960 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ybx1P62960 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ybx1P62960 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms