Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
Tpm1P58771 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Tpm1P58771 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Tpm1P58771 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Tpm1P58771 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm1P58771 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Tpm1P58771 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Tpm1P58771 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tpm1P58771 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tpm1P58771 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Gm13418-201ENSMUST00000119097 944 ntBASIC16.03■□□□□ 0.16
Tpm1P58771 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.03■□□□□ 0.16
Tpm1P58771 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tpm1P58771 Gm9726-201ENSMUST00000180321 678 ntBASIC16.03■□□□□ 0.16
Tpm1P58771 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.03■□□□□ 0.16
Tpm1P58771 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tpm1P58771 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tpm1P58771 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tpm1P58771 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tpm1P58771 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm1P58771 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tpm1P58771 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tpm1P58771 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tpm1P58771 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tpm1P58771 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tpm1P58771 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tpm1P58771 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Tpm1P58771 Gm7222-201ENSMUST00000117512 906 ntBASIC16.02■□□□□ 0.16
Tpm1P58771 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.02■□□□□ 0.16
Tpm1P58771 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tpm1P58771 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tpm1P58771 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.02■□□□□ 0.16
Tpm1P58771 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tpm1P58771 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tpm1P58771 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tpm1P58771 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tpm1P58771 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Tpm1P58771 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tpm1P58771 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.02■□□□□ 0.15
Tpm1P58771 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tpm1P58771 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tpm1P58771 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.02■□□□□ 0.15
Tpm1P58771 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tpm1P58771 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Tpm1P58771 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Tpm1P58771 Gm6089-201ENSMUST00000197666 938 ntBASIC16.01■□□□□ 0.15
Tpm1P58771 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.01■□□□□ 0.15
Tpm1P58771 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
Tpm1P58771 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Acot6-202ENSMUST00000222921 3622 ntBASIC16.01■□□□□ 0.15
Tpm1P58771 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tpm1P58771 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tpm1P58771 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16■□□□□ 0.15
Tpm1P58771 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Tpm1P58771 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Tpm1P58771 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms