Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdx1P52946 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pdx1P52946 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Pdx1P52946 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pdx1P52946 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.22□□□□□ -0.13
Pdx1P52946 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pdx1P52946 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Gm13823-201ENSMUST00000119930 345 ntBASIC14.22□□□□□ -0.13
Pdx1P52946 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.22□□□□□ -0.13
Pdx1P52946 Gm18766-201ENSMUST00000189811 808 ntBASIC14.22□□□□□ -0.13
Pdx1P52946 Gm7774-201ENSMUST00000200064 533 ntBASIC14.22□□□□□ -0.13
Pdx1P52946 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pdx1P52946 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pdx1P52946 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdx1P52946 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.21□□□□□ -0.13
Pdx1P52946 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdx1P52946 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.21□□□□□ -0.13
Pdx1P52946 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdx1P52946 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pdx1P52946 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdx1P52946 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.21□□□□□ -0.13
Pdx1P52946 Gm10253-201ENSMUST00000194270 940 ntBASIC14.21□□□□□ -0.13
Pdx1P52946 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.21□□□□□ -0.13
Pdx1P52946 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.21□□□□□ -0.13
Pdx1P52946 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdx1P52946 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.21□□□□□ -0.13
Pdx1P52946 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdx1P52946 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdx1P52946 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdx1P52946 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.21□□□□□ -0.13
Pdx1P52946 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.21□□□□□ -0.13
Pdx1P52946 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Pdx1P52946 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdx1P52946 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdx1P52946 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.21□□□□□ -0.14
Pdx1P52946 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdx1P52946 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdx1P52946 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdx1P52946 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdx1P52946 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Pdx1P52946 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Pdx1P52946 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pdx1P52946 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Pdx1P52946 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pdx1P52946 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pdx1P52946 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pdx1P52946 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdx1P52946 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Pdx1P52946 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pdx1P52946 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdx1P52946 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms