Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.04□□□□□ -0.16
Gli1P47806 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.04□□□□□ -0.16
Gli1P47806 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Gli1P47806 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.04□□□□□ -0.16
Gli1P47806 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.04□□□□□ -0.16
Gli1P47806 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.04□□□□□ -0.16
Gli1P47806 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.04□□□□□ -0.16
Gli1P47806 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Gli1P47806 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Gli1P47806 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Gli1P47806 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gli1P47806 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Gli1P47806 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Acot6-202ENSMUST00000222921 3622 ntBASIC14.03□□□□□ -0.16
Gli1P47806 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Gli1P47806 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Gli1P47806 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.03□□□□□ -0.16
Gli1P47806 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.03□□□□□ -0.16
Gli1P47806 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Gli1P47806 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.03□□□□□ -0.16
Gli1P47806 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.03□□□□□ -0.16
Gli1P47806 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.03□□□□□ -0.16
Gli1P47806 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.03□□□□□ -0.16
Gli1P47806 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.03□□□□□ -0.16
Gli1P47806 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Gli1P47806 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Gli1P47806 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gli1P47806 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gli1P47806 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gli1P47806 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Gli1P47806 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gli1P47806 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.02□□□□□ -0.16
Gli1P47806 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.02□□□□□ -0.16
Gli1P47806 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.02□□□□□ -0.16
Gli1P47806 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gli1P47806 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gli1P47806 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gli1P47806 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gli1P47806 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gli1P47806 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Gli1P47806 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gli1P47806 Mir1895-201ENSMUST00000122615 79 ntBASIC14.02□□□□□ -0.17
Gli1P47806 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Gli1P47806 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gli1P47806 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.02□□□□□ -0.17
Gli1P47806 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.02□□□□□ -0.17
Gli1P47806 Gm5186-201ENSMUST00000218781 920 ntBASIC14.02□□□□□ -0.17
Gli1P47806 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gli1P47806 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gli1P47806 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Gli1P47806 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gli1P47806 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gli1P47806 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gli1P47806 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.01□□□□□ -0.17
Gli1P47806 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.01□□□□□ -0.17
Gli1P47806 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.01□□□□□ -0.17
Gli1P47806 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gli1P47806 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.01□□□□□ -0.17
Gli1P47806 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Gli1P47806 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms