Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox18P43680 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox18P43680 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox18P43680 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Sox18P43680 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sox18P43680 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox18P43680 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox18P43680 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox18P43680 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox18P43680 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox18P43680 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox18P43680 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sox18P43680 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox18P43680 Gm12341-201ENSMUST00000119724 503 ntBASIC13.78□□□□□ -0.2
Sox18P43680 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.78□□□□□ -0.2
Sox18P43680 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox18P43680 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.78□□□□□ -0.2
Sox18P43680 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox18P43680 Gm18827-201ENSMUST00000188341 790 ntBASIC13.78□□□□□ -0.2
Sox18P43680 Gm37424-201ENSMUST00000191727 561 ntBASIC13.78□□□□□ -0.2
Sox18P43680 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sox18P43680 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sox18P43680 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.78□□□□□ -0.2
Sox18P43680 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.78□□□□□ -0.2
Sox18P43680 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox18P43680 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox18P43680 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox18P43680 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.77□□□□□ -0.2
Sox18P43680 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
Sox18P43680 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox18P43680 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.2
Sox18P43680 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.77□□□□□ -0.21
Sox18P43680 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sox18P43680 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.77□□□□□ -0.21
Sox18P43680 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Gm45784-201ENSMUST00000188360 142 ntBASIC13.77□□□□□ -0.21
Sox18P43680 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.77□□□□□ -0.21
Sox18P43680 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.77□□□□□ -0.21
Sox18P43680 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Gm17794-201ENSMUST00000220252 955 ntBASIC13.77□□□□□ -0.21
Sox18P43680 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sox18P43680 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sox18P43680 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox18P43680 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.76□□□□□ -0.21
Sox18P43680 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sox18P43680 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.76□□□□□ -0.21
Sox18P43680 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Gm22885-201ENSMUST00000157410 107 ntBASIC13.76□□□□□ -0.21
Sox18P43680 Gm43179-201ENSMUST00000198797 275 ntBASIC13.76□□□□□ -0.21
Sox18P43680 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.76□□□□□ -0.21
Sox18P43680 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.76□□□□□ -0.21
Sox18P43680 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sox18P43680 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sox18P43680 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sox18P43680 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox18P43680 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Sox18P43680 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Sox18P43680 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox18P43680 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms