Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tnfsf4P43488 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Gm12350-201ENSMUST00000121208 462 ntBASIC13.88□□□□□ -0.19
Tnfsf4P43488 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Gm45098-201ENSMUST00000207179 657 ntBASIC13.88□□□□□ -0.19
Tnfsf4P43488 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.88□□□□□ -0.19
Tnfsf4P43488 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.88□□□□□ -0.19
Tnfsf4P43488 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.88□□□□□ -0.19
Tnfsf4P43488 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tnfsf4P43488 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Gm5177-201ENSMUST00000183092 997 ntBASIC13.87□□□□□ -0.19
Tnfsf4P43488 Gm37230-201ENSMUST00000194491 818 ntBASIC13.87□□□□□ -0.19
Tnfsf4P43488 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tnfsf4P43488 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Tnfsf4P43488 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.86□□□□□ -0.19
Tnfsf4P43488 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.86□□□□□ -0.19
Tnfsf4P43488 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.86□□□□□ -0.19
Tnfsf4P43488 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tnfsf4P43488 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms