Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm3809-201ENSMUST00000180973 1006 ntBASIC21.2■□□□□ 0.98
Chd1P40201 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1P40201 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Chd1P40201 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC21.2■□□□□ 0.98
Chd1P40201 AC134254.1-201ENSMUST00000221362 167 ntBASIC21.2■□□□□ 0.98
Chd1P40201 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1P40201 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1P40201 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Chd1P40201 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Chd1P40201 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1P40201 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chd1P40201 Abhd6-203ENSMUST00000225234 1958 ntBASIC21.2■□□□□ 0.98
Chd1P40201 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Chd1P40201 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Chd1P40201 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Chd1P40201 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC21.19■□□□□ 0.98
Chd1P40201 Gm13886-201ENSMUST00000117876 1183 ntBASIC21.19■□□□□ 0.98
Chd1P40201 Gm34767-201ENSMUST00000191813 1062 ntBASIC21.19■□□□□ 0.98
Chd1P40201 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Gm18916-201ENSMUST00000198264 1246 ntBASIC21.19■□□□□ 0.98
Chd1P40201 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC21.19■□□□□ 0.98
Chd1P40201 Gm5781-201ENSMUST00000219792 443 ntBASIC21.19■□□□□ 0.98
Chd1P40201 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC21.19■□□□□ 0.98
Chd1P40201 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Chd1P40201 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC21.19■□□□□ 0.98
Chd1P40201 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chd1P40201 Gm12566-201ENSMUST00000121479 359 ntBASIC21.18■□□□□ 0.98
Chd1P40201 Gm14017-201ENSMUST00000121934 386 ntBASIC21.18■□□□□ 0.98
Chd1P40201 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC21.18■□□□□ 0.98
Chd1P40201 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1P40201 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1P40201 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1P40201 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1P40201 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1P40201 Gm18244-201ENSMUST00000219747 1566 ntBASIC21.18■□□□□ 0.98
Chd1P40201 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1P40201 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC21.18■□□□□ 0.98
Chd1P40201 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Chd1P40201 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1P40201 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1P40201 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Chd1P40201 Gm14130-201ENSMUST00000118417 987 ntBASIC21.18■□□□□ 0.98
Chd1P40201 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Chd1P40201 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC21.18■□□□□ 0.98
Chd1P40201 AC154680.1-201ENSMUST00000224376 859 ntBASIC21.18■□□□□ 0.98
Chd1P40201 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1P40201 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Chd1P40201 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd1P40201 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC21.17■□□□□ 0.98
Chd1P40201 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC21.17■□□□□ 0.98
Chd1P40201 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC21.17■□□□□ 0.98
Chd1P40201 Gm38317-201ENSMUST00000195564 343 ntBASIC21.17■□□□□ 0.98
Chd1P40201 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC21.17■□□□□ 0.98
Chd1P40201 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Chd1P40201 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chd1P40201 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC21.16■□□□□ 0.98
Chd1P40201 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 Gm7593-201ENSMUST00000187246 644 ntBASIC21.16■□□□□ 0.98
Chd1P40201 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC21.16■□□□□ 0.98
Chd1P40201 AU022133-201ENSMUST00000200601 873 ntBASIC21.16■□□□□ 0.98
Chd1P40201 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC21.16■□□□□ 0.98
Chd1P40201 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC21.16■□□□□ 0.98
Chd1P40201 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Chd1P40201 Gm16372-201ENSMUST00000073088 450 ntBASIC21.16■□□□□ 0.98
Chd1P40201 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Chd1P40201 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd1P40201 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms