Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LdlrP35951 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.3□□□□□ -0.12
LdlrP35951 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LdlrP35951 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Gm45167-201ENSMUST00000208007 322 ntBASIC14.3□□□□□ -0.12
LdlrP35951 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.3□□□□□ -0.12
LdlrP35951 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.3□□□□□ -0.12
LdlrP35951 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LdlrP35951 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LdlrP35951 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LdlrP35951 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.29□□□□□ -0.12
LdlrP35951 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LdlrP35951 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.29□□□□□ -0.12
LdlrP35951 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.29□□□□□ -0.12
LdlrP35951 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.29□□□□□ -0.12
LdlrP35951 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LdlrP35951 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LdlrP35951 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LdlrP35951 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LdlrP35951 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.29□□□□□ -0.12
LdlrP35951 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LdlrP35951 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LdlrP35951 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LdlrP35951 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.28□□□□□ -0.12
LdlrP35951 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LdlrP35951 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.28□□□□□ -0.12
LdlrP35951 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LdlrP35951 Gm4899-201ENSMUST00000178708 719 ntBASIC14.28□□□□□ -0.12
LdlrP35951 Mir6956-201ENSMUST00000183598 62 ntBASIC14.28□□□□□ -0.12
LdlrP35951 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.28□□□□□ -0.12
LdlrP35951 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.28□□□□□ -0.12
LdlrP35951 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
LdlrP35951 Gm5186-201ENSMUST00000218781 920 ntBASIC14.28□□□□□ -0.12
LdlrP35951 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.28□□□□□ -0.12
LdlrP35951 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LdlrP35951 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LdlrP35951 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LdlrP35951 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms