Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Gm13226-201ENSMUST00000117838 404 ntBASIC13.22□□□□□ -0.29
Sftpa1P35242 Mir1894-201ENSMUST00000122802 81 ntBASIC13.22□□□□□ -0.29
Sftpa1P35242 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.22□□□□□ -0.29
Sftpa1P35242 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.22□□□□□ -0.29
Sftpa1P35242 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.22□□□□□ -0.29
Sftpa1P35242 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sftpa1P35242 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sftpa1P35242 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.21□□□□□ -0.29
Sftpa1P35242 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Sftpa1P35242 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Sftpa1P35242 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.21□□□□□ -0.29
Sftpa1P35242 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sftpa1P35242 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sftpa1P35242 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.21□□□□□ -0.29
Sftpa1P35242 Gm42693-201ENSMUST00000196779 631 ntBASIC13.21□□□□□ -0.29
Sftpa1P35242 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sftpa1P35242 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sftpa1P35242 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sftpa1P35242 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Sftpa1P35242 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sftpa1P35242 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.21□□□□□ -0.3
Sftpa1P35242 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.2□□□□□ -0.3
Sftpa1P35242 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.2□□□□□ -0.3
Sftpa1P35242 Gm21470-201ENSMUST00000187680 696 ntBASIC13.2□□□□□ -0.3
Sftpa1P35242 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sftpa1P35242 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.2□□□□□ -0.3
Sftpa1P35242 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sftpa1P35242 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Sftpa1P35242 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Sftpa1P35242 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sftpa1P35242 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sftpa1P35242 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sftpa1P35242 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Sftpa1P35242 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.19□□□□□ -0.3
Sftpa1P35242 Gm10275-202ENSMUST00000168697 495 ntBASIC13.19□□□□□ -0.3
Sftpa1P35242 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sftpa1P35242 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.19□□□□□ -0.3
Sftpa1P35242 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.19□□□□□ -0.3
Sftpa1P35242 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Sftpa1P35242 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Gm10275-201ENSMUST00000092620 635 ntBASIC13.19□□□□□ -0.3
Sftpa1P35242 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sftpa1P35242 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms