Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Slc6a13P31649 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Slc6a13P31649 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Slc6a13P31649 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Slc6a13P31649 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Slc6a13P31649 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.58□□□□□ -0.08
Slc6a13P31649 Gm6222-201ENSMUST00000120787 396 ntBASIC14.58□□□□□ -0.08
Slc6a13P31649 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.58□□□□□ -0.08
Slc6a13P31649 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.58□□□□□ -0.08
Slc6a13P31649 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Slc6a13P31649 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Slc6a13P31649 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.58□□□□□ -0.08
Slc6a13P31649 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.58□□□□□ -0.08
Slc6a13P31649 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a13P31649 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.57□□□□□ -0.08
Slc6a13P31649 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.57□□□□□ -0.08
Slc6a13P31649 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Slc6a13P31649 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Gm6415-201ENSMUST00000118488 348 ntBASIC14.57□□□□□ -0.08
Slc6a13P31649 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Slc6a13P31649 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Slc6a13P31649 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a13P31649 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.56□□□□□ -0.08
Slc6a13P31649 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.56□□□□□ -0.08
Slc6a13P31649 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Gm27631-201ENSMUST00000184163 466 ntBASIC14.56□□□□□ -0.08
Slc6a13P31649 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.56□□□□□ -0.08
Slc6a13P31649 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Slc6a13P31649 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.56□□□□□ -0.08
Slc6a13P31649 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Slc6a13P31649 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a13P31649 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a13P31649 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a13P31649 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a13P31649 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a13P31649 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a13P31649 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a13P31649 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a13P31649 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slc6a13P31649 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Slc6a13P31649 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms