Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.37□□□□□ -0.43
Slc6a1P31648 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.37□□□□□ -0.43
Slc6a1P31648 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Gm6443-201ENSMUST00000203599 874 ntBASIC12.37□□□□□ -0.43
Slc6a1P31648 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.37□□□□□ -0.43
Slc6a1P31648 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.37□□□□□ -0.43
Slc6a1P31648 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Slc6a1P31648 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.37□□□□□ -0.43
Slc6a1P31648 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Slc6a1P31648 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Slc6a1P31648 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.37□□□□□ -0.43
Slc6a1P31648 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Slc6a1P31648 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Slc6a1P31648 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Slc6a1P31648 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.37□□□□□ -0.43
Slc6a1P31648 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc6a1P31648 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Slc6a1P31648 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Slc6a1P31648 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.36□□□□□ -0.43
Slc6a1P31648 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Slc6a1P31648 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.36□□□□□ -0.43
Slc6a1P31648 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Gm43514-201ENSMUST00000198852 424 ntBASIC12.36□□□□□ -0.43
Slc6a1P31648 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Gm6376-201ENSMUST00000209407 580 ntBASIC12.36□□□□□ -0.43
Slc6a1P31648 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.36□□□□□ -0.43
Slc6a1P31648 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Slc6a1P31648 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc6a1P31648 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.36□□□□□ -0.43
Slc6a1P31648 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc6a1P31648 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Slc6a1P31648 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.36□□□□□ -0.43
Slc6a1P31648 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Slc6a1P31648 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Slc6a1P31648 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Slc6a1P31648 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Slc6a1P31648 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Slc6a1P31648 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Slc6a1P31648 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms