Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BdnfP21237 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.79□□□□□ -0.2
BdnfP21237 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.79□□□□□ -0.2
BdnfP21237 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.79□□□□□ -0.2
BdnfP21237 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.79□□□□□ -0.2
BdnfP21237 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.79□□□□□ -0.2
BdnfP21237 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
BdnfP21237 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.79□□□□□ -0.2
BdnfP21237 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.79□□□□□ -0.2
BdnfP21237 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BdnfP21237 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
BdnfP21237 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
BdnfP21237 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
BdnfP21237 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.78□□□□□ -0.2
BdnfP21237 Gm13464-201ENSMUST00000119418 935 ntBASIC13.78□□□□□ -0.2
BdnfP21237 Gm12350-201ENSMUST00000121208 462 ntBASIC13.78□□□□□ -0.2
BdnfP21237 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Gm18195-201ENSMUST00000207604 706 ntBASIC13.78□□□□□ -0.2
BdnfP21237 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.78□□□□□ -0.2
BdnfP21237 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
BdnfP21237 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.78□□□□□ -0.2
BdnfP21237 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
BdnfP21237 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.78□□□□□ -0.2
BdnfP21237 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.78□□□□□ -0.2
BdnfP21237 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
BdnfP21237 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BdnfP21237 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
BdnfP21237 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
BdnfP21237 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Gm13597-201ENSMUST00000121239 375 ntBASIC13.77□□□□□ -0.21
BdnfP21237 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.77□□□□□ -0.21
BdnfP21237 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
BdnfP21237 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.21
BdnfP21237 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.77□□□□□ -0.21
BdnfP21237 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.77□□□□□ -0.21
BdnfP21237 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.77□□□□□ -0.21
BdnfP21237 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.21
BdnfP21237 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
BdnfP21237 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
BdnfP21237 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BdnfP21237 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
BdnfP21237 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms