Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
TpbpaP13438 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TpbpaP13438 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TpbpaP13438 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TpbpaP13438 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TpbpaP13438 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TpbpaP13438 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.05□□□□□ -0.32
TpbpaP13438 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TpbpaP13438 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TpbpaP13438 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TpbpaP13438 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.04□□□□□ -0.32
TpbpaP13438 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Gm7230-201ENSMUST00000173026 815 ntBASIC13.04□□□□□ -0.32
TpbpaP13438 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TpbpaP13438 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.04□□□□□ -0.32
TpbpaP13438 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TpbpaP13438 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.04□□□□□ -0.32
TpbpaP13438 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TpbpaP13438 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TpbpaP13438 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
TpbpaP13438 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TpbpaP13438 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TpbpaP13438 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.03□□□□□ -0.32
TpbpaP13438 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
TpbpaP13438 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Gm24589-201ENSMUST00000116692 94 ntBASIC13.03□□□□□ -0.32
TpbpaP13438 Gm9103-201ENSMUST00000119371 405 ntBASIC13.03□□□□□ -0.32
TpbpaP13438 Gm11764-201ENSMUST00000120221 623 ntBASIC13.03□□□□□ -0.32
TpbpaP13438 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.03□□□□□ -0.32
TpbpaP13438 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TpbpaP13438 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TpbpaP13438 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.03□□□□□ -0.32
TpbpaP13438 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.03□□□□□ -0.32
TpbpaP13438 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.03□□□□□ -0.32
TpbpaP13438 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TpbpaP13438 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.03□□□□□ -0.32
TpbpaP13438 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.03□□□□□ -0.32
TpbpaP13438 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TpbpaP13438 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TpbpaP13438 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TpbpaP13438 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TpbpaP13438 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TpbpaP13438 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TpbpaP13438 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TpbpaP13438 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.02□□□□□ -0.32
TpbpaP13438 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TpbpaP13438 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TpbpaP13438 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
TpbpaP13438 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TpbpaP13438 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.02□□□□□ -0.33
TpbpaP13438 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.02□□□□□ -0.33
TpbpaP13438 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TpbpaP13438 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.02□□□□□ -0.33
TpbpaP13438 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TpbpaP13438 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms