Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc6P10629 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Hoxc6P10629 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc6P10629 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc6P10629 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc6P10629 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxc6P10629 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Hoxc6P10629 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.86■□□□□ 0.13
Hoxc6P10629 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Gm2495-201ENSMUST00000191160 466 ntBASIC15.86■□□□□ 0.13
Hoxc6P10629 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.86■□□□□ 0.13
Hoxc6P10629 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.86■□□□□ 0.13
Hoxc6P10629 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.86■□□□□ 0.13
Hoxc6P10629 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Hoxc6P10629 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxc6P10629 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Hoxc6P10629 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.85■□□□□ 0.13
Hoxc6P10629 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.85■□□□□ 0.13
Hoxc6P10629 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Hoxc6P10629 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.85■□□□□ 0.13
Hoxc6P10629 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hoxc6P10629 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.85■□□□□ 0.13
Hoxc6P10629 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.85■□□□□ 0.13
Hoxc6P10629 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.85■□□□□ 0.13
Hoxc6P10629 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.85■□□□□ 0.13
Hoxc6P10629 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Gm45841-201ENSMUST00000207700 164 ntBASIC15.85■□□□□ 0.13
Hoxc6P10629 Gm8463-201ENSMUST00000208573 613 ntBASIC15.85■□□□□ 0.13
Hoxc6P10629 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Hoxc6P10629 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Hoxc6P10629 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Hoxc6P10629 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hoxc6P10629 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hoxc6P10629 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc6P10629 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc6P10629 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc6P10629 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.84■□□□□ 0.13
Hoxc6P10629 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Hoxc6P10629 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc6P10629 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.84■□□□□ 0.13
Hoxc6P10629 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.84■□□□□ 0.13
Hoxc6P10629 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.84■□□□□ 0.13
Hoxc6P10629 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.84■□□□□ 0.13
Hoxc6P10629 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc6P10629 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.84■□□□□ 0.13
Hoxc6P10629 Gm27839-201ENSMUST00000184242 106 ntBASIC15.84■□□□□ 0.13
Hoxc6P10629 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.84■□□□□ 0.13
Hoxc6P10629 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hoxc6P10629 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Hoxc6P10629 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hoxc6P10629 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hoxc6P10629 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Hoxc6P10629 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hoxc6P10629 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.83■□□□□ 0.12
Hoxc6P10629 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc6P10629 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc6P10629 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc6P10629 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.83■□□□□ 0.12
Hoxc6P10629 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Hoxc6P10629 Gm12957-201ENSMUST00000117835 377 ntBASIC15.83■□□□□ 0.12
Hoxc6P10629 Gm13226-201ENSMUST00000117838 404 ntBASIC15.83■□□□□ 0.12
Hoxc6P10629 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.83■□□□□ 0.12
Hoxc6P10629 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.83■□□□□ 0.12
Hoxc6P10629 Gm44608-201ENSMUST00000206827 855 ntBASIC15.83■□□□□ 0.12
Hoxc6P10629 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms