Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccl1P10146 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Ccl1P10146 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl1P10146 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Ccl1P10146 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ccl1P10146 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.14□□□□□ -0.63
Ccl1P10146 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.14□□□□□ -0.63
Ccl1P10146 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Gm11950-201ENSMUST00000121615 838 ntBASIC11.14□□□□□ -0.63
Ccl1P10146 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ccl1P10146 Gm12497-201ENSMUST00000138778 237 ntBASIC11.14□□□□□ -0.63
Ccl1P10146 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Mir3081-201ENSMUST00000175305 84 ntBASIC11.14□□□□□ -0.63
Ccl1P10146 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.14□□□□□ -0.63
Ccl1P10146 Gm7506-201ENSMUST00000207758 815 ntBASIC11.14□□□□□ -0.63
Ccl1P10146 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Gm18032-201ENSMUST00000222541 538 ntBASIC11.14□□□□□ -0.63
Ccl1P10146 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ccl1P10146 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccl1P10146 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl1P10146 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccl1P10146 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ccl1P10146 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl1P10146 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl1P10146 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl1P10146 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Ccl1P10146 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.13□□□□□ -0.63
Ccl1P10146 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.13□□□□□ -0.63
Ccl1P10146 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ccl1P10146 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ccl1P10146 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ccl1P10146 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccl1P10146 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.13□□□□□ -0.63
Ccl1P10146 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.13□□□□□ -0.63
Ccl1P10146 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.13□□□□□ -0.63
Ccl1P10146 Grk6-205ENSMUST00000224653 2976 ntBASIC11.13□□□□□ -0.63
Ccl1P10146 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl1P10146 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ccl1P10146 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccl1P10146 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccl1P10146 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.12□□□□□ -0.63
Ccl1P10146 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Ccl1P10146 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccl1P10146 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms