Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.4□□□□□ -0.26
Sod1P08228 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.4□□□□□ -0.26
Sod1P08228 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Sod1P08228 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.4□□□□□ -0.26
Sod1P08228 Gm26464-201ENSMUST00000157094 305 ntBASIC13.4□□□□□ -0.26
Sod1P08228 Gm8927-201ENSMUST00000181978 981 ntBASIC13.4□□□□□ -0.26
Sod1P08228 Gm27839-201ENSMUST00000184242 106 ntBASIC13.4□□□□□ -0.26
Sod1P08228 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.4□□□□□ -0.26
Sod1P08228 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.4□□□□□ -0.26
Sod1P08228 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Gm3222-201ENSMUST00000071282 990 ntBASIC13.4□□□□□ -0.26
Sod1P08228 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.4□□□□□ -0.26
Sod1P08228 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sod1P08228 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sod1P08228 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sod1P08228 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.27
Sod1P08228 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Sod1P08228 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sod1P08228 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.39□□□□□ -0.27
Sod1P08228 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sod1P08228 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Sod1P08228 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.39□□□□□ -0.27
Sod1P08228 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Sod1P08228 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sod1P08228 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.39□□□□□ -0.27
Sod1P08228 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Gm15429-201ENSMUST00000151268 798 ntBASIC13.39□□□□□ -0.27
Sod1P08228 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.39□□□□□ -0.27
Sod1P08228 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Gm24420-201ENSMUST00000176676 59 ntBASIC13.39□□□□□ -0.27
Sod1P08228 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sod1P08228 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.39□□□□□ -0.27
Sod1P08228 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sod1P08228 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Sod1P08228 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.38□□□□□ -0.27
Sod1P08228 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.38□□□□□ -0.27
Sod1P08228 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sod1P08228 Mir1982-201ENSMUST00000157368 74 ntBASIC13.38□□□□□ -0.27
Sod1P08228 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms