Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.29□□□□□ -0.44
P04946 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P04946 Gm22189-201ENSMUST00000103822 86 ntBASIC12.29□□□□□ -0.44
P04946 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
P04946 Gm21854-201ENSMUST00000179901 471 ntBASIC12.29□□□□□ -0.44
P04946 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.29□□□□□ -0.44
P04946 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.29□□□□□ -0.44
P04946 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.29□□□□□ -0.44
P04946 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.29□□□□□ -0.44
P04946 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P04946 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P04946 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.29□□□□□ -0.44
P04946 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.29□□□□□ -0.44
P04946 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.29□□□□□ -0.44
P04946 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04946 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.28□□□□□ -0.44
P04946 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.28□□□□□ -0.44
P04946 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
P04946 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
P04946 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.28□□□□□ -0.44
P04946 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
P04946 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.28□□□□□ -0.44
P04946 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
P04946 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04946 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
P04946 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.27□□□□□ -0.44
P04946 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04946 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04946 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.27□□□□□ -0.44
P04946 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.27□□□□□ -0.44
P04946 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
P04946 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04946 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.27□□□□□ -0.44
P04946 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04946 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04946 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04946 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04946 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04946 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.27□□□□□ -0.45
P04946 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04946 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04946 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04946 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.27□□□□□ -0.45
P04946 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.27□□□□□ -0.45
P04946 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.27□□□□□ -0.45
P04946 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P04946 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04946 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
P04946 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.27□□□□□ -0.45
P04946 Gm4804-201ENSMUST00000182234 999 ntBASIC12.27□□□□□ -0.45
P04946 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.27□□□□□ -0.45
P04946 Gm21470-201ENSMUST00000187680 696 ntBASIC12.27□□□□□ -0.45
P04946 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04946 Gm6218-201ENSMUST00000219812 628 ntBASIC12.27□□□□□ -0.45
P04946 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.27□□□□□ -0.45
P04946 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
P04946 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.27□□□□□ -0.45
P04946 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P04946 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.27□□□□□ -0.45
P04946 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04946 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
P04946 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
P04946 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04946 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.26□□□□□ -0.45
P04946 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04946 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
P04946 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04946 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04946 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
P04946 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms