Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Hcn1O88704 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.78□□□□□ -0.2
Hcn1O88704 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hcn1O88704 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Hcn1O88704 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.78□□□□□ -0.2
Hcn1O88704 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.78□□□□□ -0.2
Hcn1O88704 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.78□□□□□ -0.2
Hcn1O88704 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.78□□□□□ -0.2
Hcn1O88704 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.78□□□□□ -0.2
Hcn1O88704 Rpph1-201ENSMUST00000175096 319 ntBASIC13.78□□□□□ -0.2
Hcn1O88704 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.78□□□□□ -0.2
Hcn1O88704 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.78□□□□□ -0.2
Hcn1O88704 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hcn1O88704 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hcn1O88704 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.78□□□□□ -0.2
Hcn1O88704 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Hcn1O88704 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.78□□□□□ -0.2
Hcn1O88704 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.78□□□□□ -0.2
Hcn1O88704 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.78□□□□□ -0.2
Hcn1O88704 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Hcn1O88704 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.78□□□□□ -0.2
Hcn1O88704 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hcn1O88704 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hcn1O88704 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hcn1O88704 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hcn1O88704 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hcn1O88704 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Hcn1O88704 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hcn1O88704 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Hcn1O88704 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.77□□□□□ -0.21
Hcn1O88704 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.77□□□□□ -0.21
Hcn1O88704 Gm11025-201ENSMUST00000140773 466 ntBASIC13.77□□□□□ -0.21
Hcn1O88704 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.77□□□□□ -0.21
Hcn1O88704 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Hcn1O88704 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.77□□□□□ -0.21
Hcn1O88704 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.77□□□□□ -0.21
Hcn1O88704 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.77□□□□□ -0.21
Hcn1O88704 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Hcn1O88704 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Hcn1O88704 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Hcn1O88704 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hcn1O88704 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hcn1O88704 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hcn1O88704 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hcn1O88704 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hcn1O88704 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.76□□□□□ -0.21
Hcn1O88704 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.76□□□□□ -0.21
Hcn1O88704 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hcn1O88704 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hcn1O88704 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hcn1O88704 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Hcn1O88704 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Hcn1O88704 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Hcn1O88704 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.76□□□□□ -0.21
Hcn1O88704 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Hcn1O88704 Gm27494-201ENSMUST00000184735 189 ntBASIC13.76□□□□□ -0.21
Hcn1O88704 Gm20553-201ENSMUST00000204205 844 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 191.1 ms