Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ubr1O70481 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.31■□□□□ 0.52
Ubr1O70481 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC18.3■□□□□ 0.52
Ubr1O70481 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.3■□□□□ 0.52
Ubr1O70481 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC18.3■□□□□ 0.52
Ubr1O70481 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC18.3■□□□□ 0.52
Ubr1O70481 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.3■□□□□ 0.52
Ubr1O70481 Gm44397-201ENSMUST00000195950 113 ntBASIC18.3■□□□□ 0.52
Ubr1O70481 Gm42929-201ENSMUST00000198374 1286 ntBASIC18.3■□□□□ 0.52
Ubr1O70481 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC18.3■□□□□ 0.52
Ubr1O70481 Gm17870-201ENSMUST00000219489 1174 ntBASIC18.3■□□□□ 0.52
Ubr1O70481 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Ubr1O70481 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.3■□□□□ 0.52
Ubr1O70481 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC18.3■□□□□ 0.52
Ubr1O70481 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.3■□□□□ 0.52
Ubr1O70481 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Gm12203-201ENSMUST00000118235 598 ntBASIC18.3■□□□□ 0.52
Ubr1O70481 Gm12209-201ENSMUST00000120089 596 ntBASIC18.3■□□□□ 0.52
Ubr1O70481 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC18.3■□□□□ 0.52
Ubr1O70481 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC18.3■□□□□ 0.52
Ubr1O70481 Gm43118-201ENSMUST00000199149 775 ntBASIC18.3■□□□□ 0.52
Ubr1O70481 Gm9728-201ENSMUST00000200197 1055 ntBASIC18.3■□□□□ 0.52
Ubr1O70481 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ubr1O70481 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubr1O70481 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ubr1O70481 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Ubr1O70481 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.29■□□□□ 0.52
Ubr1O70481 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Ubr1O70481 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC18.29■□□□□ 0.52
Ubr1O70481 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC18.29■□□□□ 0.52
Ubr1O70481 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ubr1O70481 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ubr1O70481 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.29■□□□□ 0.52
Ubr1O70481 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubr1O70481 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubr1O70481 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ubr1O70481 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ubr1O70481 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
Ubr1O70481 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ubr1O70481 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubr1O70481 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubr1O70481 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubr1O70481 Gm22018-201ENSMUST00000104357 131 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Gm12537-201ENSMUST00000119266 1002 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Gm12070-201ENSMUST00000119551 1002 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Gm12671-201ENSMUST00000119978 1002 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Gm13292-201ENSMUST00000120014 1000 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Gm12403-201ENSMUST00000121384 959 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC18.28■□□□□ 0.52
Ubr1O70481 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Gm10359-201ENSMUST00000180167 1002 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Gm12033-201ENSMUST00000180654 1002 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Gm5559-201ENSMUST00000180755 1002 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ubr1O70481 Gm4335-201ENSMUST00000182581 1004 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Gm5069-202ENSMUST00000192714 1011 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 AC140451.2-201ENSMUST00000228030 664 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Gm8399-201ENSMUST00000082300 1117 ntBASIC18.28■□□□□ 0.52
Ubr1O70481 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms