Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pde6dO55057 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pde6dO55057 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pde6dO55057 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pde6dO55057 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.32□□□□□ -0.6
Pde6dO55057 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pde6dO55057 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.32□□□□□ -0.6
Pde6dO55057 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.32□□□□□ -0.6
Pde6dO55057 Gm8584-201ENSMUST00000171982 758 ntBASIC11.32□□□□□ -0.6
Pde6dO55057 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.32□□□□□ -0.6
Pde6dO55057 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Gm9726-201ENSMUST00000180321 678 ntBASIC11.32□□□□□ -0.6
Pde6dO55057 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.32□□□□□ -0.6
Pde6dO55057 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.32□□□□□ -0.6
Pde6dO55057 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pde6dO55057 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Pde6dO55057 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.32□□□□□ -0.6
Pde6dO55057 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.32□□□□□ -0.6
Pde6dO55057 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pde6dO55057 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pde6dO55057 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.31□□□□□ -0.6
Pde6dO55057 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Pde6dO55057 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Gm9013-201ENSMUST00000132939 882 ntBASIC11.31□□□□□ -0.6
Pde6dO55057 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Gm25927-201ENSMUST00000175058 117 ntBASIC11.31□□□□□ -0.6
Pde6dO55057 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pde6dO55057 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pde6dO55057 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.31□□□□□ -0.6
Pde6dO55057 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.31□□□□□ -0.6
Pde6dO55057 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.31□□□□□ -0.6
Pde6dO55057 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pde6dO55057 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.3□□□□□ -0.6
Pde6dO55057 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pde6dO55057 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms