Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.09■□□□□ 0.33
Smarce1O54941 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Gm12350-201ENSMUST00000121208 462 ntBASIC17.09■□□□□ 0.33
Smarce1O54941 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.09■□□□□ 0.33
Smarce1O54941 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.09■□□□□ 0.33
Smarce1O54941 Gm5177-201ENSMUST00000183092 997 ntBASIC17.09■□□□□ 0.33
Smarce1O54941 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.09■□□□□ 0.33
Smarce1O54941 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.09■□□□□ 0.33
Smarce1O54941 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.09■□□□□ 0.33
Smarce1O54941 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.09■□□□□ 0.33
Smarce1O54941 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarce1O54941 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarce1O54941 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarce1O54941 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Smarce1O54941 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarce1O54941 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarce1O54941 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Smarce1O54941 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarce1O54941 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarce1O54941 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.08■□□□□ 0.33
Smarce1O54941 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarce1O54941 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smarce1O54941 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smarce1O54941 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarce1O54941 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarce1O54941 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarce1O54941 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarce1O54941 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarce1O54941 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smarce1O54941 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smarce1O54941 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Smarce1O54941 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarce1O54941 Gm27301-201ENSMUST00000184012 127 ntBASIC17.08■□□□□ 0.32
Smarce1O54941 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Smarce1O54941 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.08■□□□□ 0.32
Smarce1O54941 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarce1O54941 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.08■□□□□ 0.32
Smarce1O54941 Gm10819-201ENSMUST00000099988 561 ntBASIC17.08■□□□□ 0.32
Smarce1O54941 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarce1O54941 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Smarce1O54941 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarce1O54941 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarce1O54941 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.08■□□□□ 0.32
Smarce1O54941 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smarce1O54941 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.07■□□□□ 0.32
Smarce1O54941 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smarce1O54941 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.07■□□□□ 0.32
Smarce1O54941 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smarce1O54941 Gm5479-201ENSMUST00000160578 435 ntBASIC17.07■□□□□ 0.32
Smarce1O54941 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smarce1O54941 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.07■□□□□ 0.32
Smarce1O54941 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.07■□□□□ 0.32
Smarce1O54941 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.07■□□□□ 0.32
Smarce1O54941 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Smarce1O54941 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarce1O54941 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Smarce1O54941 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Smarce1O54941 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.06■□□□□ 0.32
Smarce1O54941 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smarce1O54941 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Smarce1O54941 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarce1O54941 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Smarce1O54941 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms