Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.16■□□□□ 0.18
Stx1aO35526 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Stx1aO35526 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
Stx1aO35526 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.16■□□□□ 0.18
Stx1aO35526 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.16■□□□□ 0.18
Stx1aO35526 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Stx1aO35526 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Stx1aO35526 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.16■□□□□ 0.18
Stx1aO35526 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.16■□□□□ 0.18
Stx1aO35526 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Stx1aO35526 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Stx1aO35526 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.15■□□□□ 0.18
Stx1aO35526 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Stx1aO35526 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.15■□□□□ 0.18
Stx1aO35526 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Gm7153-201ENSMUST00000117092 455 ntBASIC16.15■□□□□ 0.18
Stx1aO35526 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.15■□□□□ 0.18
Stx1aO35526 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 AV026068-213ENSMUST00000223675 1171 ntBASIC16.15■□□□□ 0.18
Stx1aO35526 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Stx1aO35526 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.15■□□□□ 0.18
Stx1aO35526 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.15■□□□□ 0.18
Stx1aO35526 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Stx1aO35526 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Stx1aO35526 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Stx1aO35526 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Stx1aO35526 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Stx1aO35526 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Stx1aO35526 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.14■□□□□ 0.17
Stx1aO35526 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.14■□□□□ 0.17
Stx1aO35526 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.14■□□□□ 0.17
Stx1aO35526 Gm37230-201ENSMUST00000194491 818 ntBASIC16.14■□□□□ 0.17
Stx1aO35526 Gm2272-201ENSMUST00000194903 582 ntBASIC16.14■□□□□ 0.17
Stx1aO35526 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.14■□□□□ 0.17
Stx1aO35526 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Stx1aO35526 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.13■□□□□ 0.17
Stx1aO35526 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stx1aO35526 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stx1aO35526 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stx1aO35526 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stx1aO35526 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stx1aO35526 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stx1aO35526 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stx1aO35526 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Stx1aO35526 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stx1aO35526 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stx1aO35526 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Stx1aO35526 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Stx1aO35526 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.13■□□□□ 0.17
Stx1aO35526 Gm7862-201ENSMUST00000121461 292 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms