Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.53□□□□□ -0.24
Cx3cl1O35188 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cx3cl1O35188 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Cx3cl1O35188 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cx3cl1O35188 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cx3cl1O35188 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cx3cl1O35188 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cx3cl1O35188 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cx3cl1O35188 Carlr-201ENSMUST00000181515 2574 ntBASIC13.52□□□□□ -0.24
Cx3cl1O35188 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cx3cl1O35188 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cx3cl1O35188 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cx3cl1O35188 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cx3cl1O35188 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cx3cl1O35188 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.52□□□□□ -0.25
Cx3cl1O35188 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Gm37230-201ENSMUST00000194491 818 ntBASIC13.52□□□□□ -0.25
Cx3cl1O35188 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Gm18049-201ENSMUST00000208909 581 ntBASIC13.52□□□□□ -0.25
Cx3cl1O35188 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cx3cl1O35188 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.51□□□□□ -0.25
Cx3cl1O35188 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.51□□□□□ -0.25
Cx3cl1O35188 Gm7774-201ENSMUST00000200064 533 ntBASIC13.51□□□□□ -0.25
Cx3cl1O35188 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cx3cl1O35188 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.5□□□□□ -0.25
Cx3cl1O35188 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.5□□□□□ -0.25
Cx3cl1O35188 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.5□□□□□ -0.25
Cx3cl1O35188 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cx3cl1O35188 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms