Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.93□□□□□ -0.02
Ebf3O08791 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Ebf3O08791 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Ebf3O08791 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.93□□□□□ -0.02
Ebf3O08791 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ebf3O08791 Gm45098-201ENSMUST00000207179 657 ntBASIC14.93□□□□□ -0.02
Ebf3O08791 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.93□□□□□ -0.02
Ebf3O08791 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.93□□□□□ -0.02
Ebf3O08791 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ebf3O08791 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ebf3O08791 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.93□□□□□ -0.02
Ebf3O08791 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf3O08791 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Ebf3O08791 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Ebf3O08791 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.92□□□□□ -0.02
Ebf3O08791 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Gm15321-201ENSMUST00000121290 288 ntBASIC14.92□□□□□ -0.02
Ebf3O08791 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.92□□□□□ -0.02
Ebf3O08791 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.92□□□□□ -0.02
Ebf3O08791 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ebf3O08791 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Ebf3O08791 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ebf3O08791 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ebf3O08791 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ebf3O08791 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ebf3O08791 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.92□□□□□ -0.02
Ebf3O08791 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf3O08791 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.91□□□□□ -0.02
Ebf3O08791 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
Ebf3O08791 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Ebf3O08791 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.91□□□□□ -0.02
Ebf3O08791 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.91□□□□□ -0.02
Ebf3O08791 Gm43438-201ENSMUST00000198133 379 ntBASIC14.91□□□□□ -0.02
Ebf3O08791 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.91□□□□□ -0.02
Ebf3O08791 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
Ebf3O08791 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ebf3O08791 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf3O08791 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.9□□□□□ -0.02
Ebf3O08791 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ebf3O08791 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms