Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4340L7N2C4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm4340L7N2C4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm4340L7N2C4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm4340L7N2C4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm4340L7N2C4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.08■□□□□ 0.32
Gm4340L7N2C4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Gm37714-201ENSMUST00000194742 342 ntBASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Gm9794-201ENSMUST00000202370 423 ntBASIC17.08■□□□□ 0.32
Gm4340L7N2C4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm4340L7N2C4 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Gm45668-201ENSMUST00000211271 493 ntBASIC17.07■□□□□ 0.32
Gm4340L7N2C4 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gm4340L7N2C4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms