Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm20708H3BKF4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm20708H3BKF4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm20708H3BKF4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Gm20708H3BKF4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Gm20708H3BKF4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm20708H3BKF4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Gm20708H3BKF4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Gm20708H3BKF4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm20708H3BKF4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm20708H3BKF4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Gm38294-201ENSMUST00000192831 381 ntBASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Gm45453-201ENSMUST00000211758 853 ntBASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm20708H3BKF4 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.02□□□□□ -0.48
Gm20708H3BKF4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm20708H3BKF4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Gm20708H3BKF4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Gm20708H3BKF4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm20708H3BKF4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm20708H3BKF4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Gm20708H3BKF4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm20708H3BKF4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm20708H3BKF4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms