Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdh1F7BJK1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Gm7862-201ENSMUST00000121461 292 ntBASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh1F7BJK1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Gm2272-201ENSMUST00000194903 582 ntBASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Gm18195-201ENSMUST00000207604 706 ntBASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdh1F7BJK1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Gm13884-201ENSMUST00000118103 829 ntBASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Gm15173-201ENSMUST00000122049 433 ntBASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh1F7BJK1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms