Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb9E9Q5G2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Gm14057-201ENSMUST00000120631 482 ntBASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Gm3436-201ENSMUST00000179930 840 ntBASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Gm44608-201ENSMUST00000206827 855 ntBASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb9E9Q5G2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Gm4875-201ENSMUST00000118257 786 ntBASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb9E9Q5G2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb9E9Q5G2 Gm33320-201ENSMUST00000192232 530 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms