Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Gm2651-201ENSMUST00000203560 838 ntBASIC10.84□□□□□ -0.67
Gm5878E9PUB3 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.84□□□□□ -0.67
Gm5878E9PUB3 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.84□□□□□ -0.67
Gm5878E9PUB3 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gm5878E9PUB3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.83□□□□□ -0.67
Gm5878E9PUB3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Gm5878E9PUB3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Gm23958-201ENSMUST00000157207 105 ntBASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.83□□□□□ -0.68
Gm5878E9PUB3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm5878E9PUB3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Gm14140-201ENSMUST00000119999 995 ntBASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gm5878E9PUB3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms