Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col6a4A2AX52 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Gm4984-201ENSMUST00000115987 360 ntBASIC12.1□□□□□ -0.47
Col6a4A2AX52 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Gm45784-201ENSMUST00000188360 142 ntBASIC12.1□□□□□ -0.47
Col6a4A2AX52 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.1□□□□□ -0.47
Col6a4A2AX52 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col6a4A2AX52 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Gm12585-201ENSMUST00000117307 290 ntBASIC12.1□□□□□ -0.47
Col6a4A2AX52 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Gm6222-201ENSMUST00000120787 396 ntBASIC12.1□□□□□ -0.47
Col6a4A2AX52 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Mir3102-201ENSMUST00000175555 104 ntBASIC12.1□□□□□ -0.47
Col6a4A2AX52 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.1□□□□□ -0.47
Col6a4A2AX52 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a4A2AX52 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.09□□□□□ -0.47
Col6a4A2AX52 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Gm45453-201ENSMUST00000211758 853 ntBASIC12.09□□□□□ -0.47
Col6a4A2AX52 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.09□□□□□ -0.47
Col6a4A2AX52 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.09□□□□□ -0.47
Col6a4A2AX52 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.09□□□□□ -0.47
Col6a4A2AX52 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a4A2AX52 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col6a4A2AX52 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col6a4A2AX52 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Col6a4A2AX52 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a4A2AX52 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a4A2AX52 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a4A2AX52 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a4A2AX52 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a4A2AX52 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col6a4A2AX52 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms