Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Gm8584-201ENSMUST00000171982 758 ntBASIC12□□□□□ -0.49
Trav12-1A0N8R1 Mir5126-201ENSMUST00000175513 77 ntBASIC12□□□□□ -0.49
Trav12-1A0N8R1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Gm17971-201ENSMUST00000190239 806 ntBASIC12□□□□□ -0.49
Trav12-1A0N8R1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Thap2-203ENSMUST00000218989 527 ntBASIC12□□□□□ -0.49
Trav12-1A0N8R1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Gm6159-201ENSMUST00000191249 1724 ntBASIC12□□□□□ -0.49
Trav12-1A0N8R1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12-1A0N8R1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-1A0N8R1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav12-1A0N8R1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms