Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Gm17968-201ENSMUST00000194902 784 ntBASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Ccdc112A0AUP1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc112A0AUP1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Gm14140-201ENSMUST00000119999 995 ntBASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Gm15483-201ENSMUST00000120338 456 ntBASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ccdc112A0AUP1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms