Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Gm15427-201ENSMUST00000117288 531 ntBASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Gm14494-201ENSMUST00000118786 435 ntBASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Olfr286-202ENSMUST00000205305 969 ntBASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav9n-2A0A0G2JDP3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9n-2A0A0G2JDP3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms