Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm6659-201ENSMUST00000174752 547 ntBASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-5A0A075B6B9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm27704-201ENSMUST00000185094 107 ntBASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.59□□□□□ -0.55
Trav6d-5A0A075B6B9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Trav6d-5A0A075B6B9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav6d-5A0A075B6B9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav6d-5A0A075B6B9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav6d-5A0A075B6B9 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms