Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx9Q9WUH2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Gm24543-201ENSMUST00000103867 82 ntBASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx9Q9WUH2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Gm10275-202ENSMUST00000168697 495 ntBASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Gm10275-201ENSMUST00000092620 635 ntBASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx9Q9WUH2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx9Q9WUH2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx9Q9WUH2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx9Q9WUH2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx9Q9WUH2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx9Q9WUH2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms