Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Gm44771-201ENSMUST00000206975 626 ntBASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chaf1aQ9QWF0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.12■□□□□ 0.17
Chaf1aQ9QWF0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.11■□□□□ 0.17
Chaf1aQ9QWF0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Gm12350-201ENSMUST00000121208 462 ntBASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms