Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm11524-201ENSMUST00000119349 807 ntBASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Gm38671-201ENSMUST00000200573 130 ntBASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-4Q9EQM3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gm18056-201ENSMUST00000207670 568 ntBASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gm18061-201ENSMUST00000208350 562 ntBASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gm18063-201ENSMUST00000208529 568 ntBASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gm18052-201ENSMUST00000208750 559 ntBASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx2-4Q9EQM3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Gm24644-201ENSMUST00000157114 139 ntBASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Mir3547-201ENSMUST00000175461 88 ntBASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Gm27514-201ENSMUST00000183692 110 ntBASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Gm43818-201ENSMUST00000200605 466 ntBASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Gm9823-201ENSMUST00000051212 327 ntBASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Gm10012-201ENSMUST00000078252 192 ntBASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-4Q9EQM3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-4Q9EQM3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms