Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnft1Q9DCN7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnft1Q9DCN7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnft1Q9DCN7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnft1Q9DCN7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnft1Q9DCN7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnft1Q9DCN7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnft1Q9DCN7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnft1Q9DCN7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnft1Q9DCN7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnft1Q9DCN7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Gm2272-201ENSMUST00000194903 582 ntBASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnft1Q9DCN7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Gm24589-201ENSMUST00000116692 94 ntBASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnft1Q9DCN7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Gm10060-201ENSMUST00000212002 111 ntBASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnft1Q9DCN7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms