Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp2aQ9DB34 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Gm24158-201ENSMUST00000175263 71 ntBASIC15.03■□□□□ -0
Chmp2aQ9DB34 Gm7774-201ENSMUST00000200064 533 ntBASIC15.03■□□□□ -0
Chmp2aQ9DB34 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Gm8396-201ENSMUST00000057361 823 ntBASIC15.03■□□□□ -0
Chmp2aQ9DB34 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp2aQ9DB34 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2aQ9DB34 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Chmp2aQ9DB34 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Gm9182-201ENSMUST00000217829 639 ntBASIC15.02■□□□□ -0
Chmp2aQ9DB34 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp2aQ9DB34 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2aQ9DB34 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2aQ9DB34 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2aQ9DB34 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Chmp2aQ9DB34 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.02□□□□□ -0.01
Chmp2aQ9DB34 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2aQ9DB34 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Chmp2aQ9DB34 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2aQ9DB34 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2aQ9DB34 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp2aQ9DB34 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Chmp2aQ9DB34 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Gm37230-201ENSMUST00000194491 818 ntBASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Gm5779-201ENSMUST00000218467 910 ntBASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp2aQ9DB34 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp2aQ9DB34 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms