Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Nip7Q9CXK8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nip7Q9CXK8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nip7Q9CXK8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nip7Q9CXK8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nip7Q9CXK8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nip7Q9CXK8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nip7Q9CXK8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nip7Q9CXK8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nip7Q9CXK8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.83■□□□□ 0.45
Nip7Q9CXK8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nip7Q9CXK8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nip7Q9CXK8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Nip7Q9CXK8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Gm11425-201ENSMUST00000119608 498 ntBASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Gm9396-201ENSMUST00000076703 567 ntBASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nip7Q9CXK8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Gm4984-201ENSMUST00000115987 360 ntBASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Gm5425-201ENSMUST00000214125 459 ntBASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Gm9899-201ENSMUST00000065519 555 ntBASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nip7Q9CXK8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nip7Q9CXK8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Gm27892-201ENSMUST00000185017 106 ntBASIC17.8■□□□□ 0.44
Nip7Q9CXK8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms