Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg3Q9CQV4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg3Q9CQV4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg3Q9CQV4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg3Q9CQV4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg3Q9CQV4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Retreg3Q9CQV4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg3Q9CQV4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.58□□□□□ -0.08
Retreg3Q9CQV4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Retreg3Q9CQV4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg3Q9CQV4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Gm43474-201ENSMUST00000196415 774 ntBASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg3Q9CQV4 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Gm43339-201ENSMUST00000200032 1606 ntBASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Gm13015-201ENSMUST00000118674 204 ntBASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Gm43125-201ENSMUST00000201724 730 ntBASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Gm45072-201ENSMUST00000208673 929 ntBASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Gm8679-201ENSMUST00000210651 1036 ntBASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Gm9182-201ENSMUST00000217829 639 ntBASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 AC165260.5-201ENSMUST00000224640 1247 ntBASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Gm37965-201ENSMUST00000195304 1362 ntBASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.56□□□□□ -0.08
Retreg3Q9CQV4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retreg3Q9CQV4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms