Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Sec61bQ9CQS8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gm13464-201ENSMUST00000119418 935 ntBASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gm14719-201ENSMUST00000121891 340 ntBASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gm16215-201ENSMUST00000161990 637 ntBASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gm43997-201ENSMUST00000203986 1005 ntBASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 AC238811.1-201ENSMUST00000225302 441 ntBASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 AC132863.2-201ENSMUST00000226643 799 ntBASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Sec61bQ9CQS8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Gm19430-201ENSMUST00000193847 2137 ntBASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Gm30655-201ENSMUST00000220498 1383 ntTSL 5 BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Sec61bQ9CQS8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms