Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Pck2-205ENSMUST00000226352 2784 ntBASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chchd1Q9CQA6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Slc35b2-207ENSMUST00000226086 850 ntBASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chchd1Q9CQA6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Gm19164-201ENSMUST00000210667 640 ntBASIC10.81□□□□□ -0.68
Chchd1Q9CQA6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms