Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Cstf1Q99LC2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Gm27701-201ENSMUST00000184498 110 ntBASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Gm45331-201ENSMUST00000209868 554 ntBASIC14.37□□□□□ -0.11
Cstf1Q99LC2 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cstf1Q99LC2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.36□□□□□ -0.11
Cstf1Q99LC2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Mir125a-201ENSMUST00000083545 68 ntBASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cstf1Q99LC2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cstf1Q99LC2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms