Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb5Q91XZ5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Gm5354-201ENSMUST00000182417 973 ntBASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb5Q91XZ5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb5Q91XZ5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Gm4804-201ENSMUST00000182234 999 ntBASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb5Q91XZ5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb5Q91XZ5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms