Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.22□□□□□ -0.13
Vsx1Q91V10 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vsx1Q91V10 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.21□□□□□ -0.13
Vsx1Q91V10 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.21□□□□□ -0.13
Vsx1Q91V10 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.21□□□□□ -0.13
Vsx1Q91V10 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.21□□□□□ -0.13
Vsx1Q91V10 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Gm45453-201ENSMUST00000211758 853 ntBASIC14.21□□□□□ -0.13
Vsx1Q91V10 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vsx1Q91V10 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vsx1Q91V10 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vsx1Q91V10 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Vsx1Q91V10 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vsx1Q91V10 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vsx1Q91V10 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.14
Vsx1Q91V10 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.21□□□□□ -0.14
Vsx1Q91V10 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.2□□□□□ -0.14
Vsx1Q91V10 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Vsx1Q91V10 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.2□□□□□ -0.14
Vsx1Q91V10 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.2□□□□□ -0.14
Vsx1Q91V10 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx1Q91V10 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx1Q91V10 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms