Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retreg1dQ8VE91 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg1dQ8VE91 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retreg1dQ8VE91 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Gm14057-201ENSMUST00000120631 482 ntBASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Gm20949-201ENSMUST00000206478 952 ntBASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retreg1dQ8VE91 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.29□□□□□ -0.12
Retreg1dQ8VE91 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Gm9824-201ENSMUST00000178707 561 ntBASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retreg1dQ8VE91 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms